CDS
| Accession Number | TCMCG065C01177 |
| gbkey | CDS |
| Protein Id | XP_004952119.1 |
| Location | join(9848585..9848874,9848998..9849119,9849250..9849340,9849480..9849606,9849691..9849794,9851438..9851900) |
| Gene | LOC101758819 |
| GeneID | 101758819 |
| Organism | Setaria italica |
Protein
| Length | 398aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_004952062.4 |
| Definition | pre-mRNA-splicing factor 38 isoform X1 [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | PRP38 family |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12849
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005681 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071011 [VIEW IN EMBL-EBI] GO:1990904 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAACCGCACGGACCCCCTCGCGAAGAGCATCCACGGGACGAACCCGCAGAACCTGGTGGAGAAGATTGTGCGCTCCAAGATCTACCAGAGCACCTACTGGAAGGAGCAGTGCTTCGGCCTCACCGCCGAGACGTTGGTCGACAAGGCTATGGAGCTCGACCACACCGGCGGGACCTACGGCGGCAACCGCAAGCCCACCCCGTTCCTCTGCCTCGCGCTCAAGATGCTGCAGATCCAGCCCGACAAGGACATCGTCGTCGAGTTCATCAAGAACGAGGATTACAAGTATGTTCGCGTTCTGGGGGCCTTCTACCTGCGCCTCACCGGCACCGTTGCTGATGTCTACCAGTATCTGGAGCCACTCTACAACGACTACCGCAAGCTCAGGCATAAGCTCAGCGATGGACAGTTTGCACTTACCCATGTTGATGAGTTCATCGATGAGTTGCTGACCAAGGACTACTCCTGTGATACAGCCCTCCCCCGTATTCAGAAAAGATGGGTTCTTGAAGCGTCTGGAACTCTAGAACCAAGAAGAAGTGCGCTTGAGGATGATTTTGAGGAAGAAGAGGAAGACAAGGAGGAACAACCTATGGAAATTGACCAGCCTAATGGCCATGAGAAGGATAATCATCGTGGAAGAAGCCCTGCAAGGGACCGGGACCGGGACCGGGACCGGGACCGGGACCGGGACCGGGACCGGGACCGGAAACACGAAAGGCATCACAGGGACCGAGATCATGATAGAGATCGGGATTACGATAGGGACTATGGGAGAGGACGGGACAGAGACCGAGATAGAGATCGTGAAAGGGACAGAAACAGGGATAGGGATCGCGACCGTCACCGTCTGCGAGACGATGACTACAGCCGAGACAGGGACCGAGACCGTGAGAGGGATGGTAGGGAAAGGGAACGCCGGGACAGAGACCGTGGCAGGCACAGGAGCCGCTCAAGGAGCAGGGATCGGCGAGACAGAGACCGTGAAGATGGAGAGTACCGCAGGAGGCGTGATCGTGGCAGTGTGAGTCCTCGAGGACGTGGTGAGGATGGCGCCACAAGGGAGGAACCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGAACCAAATGCTCCGGATCCAAATGATCCTGAGATCATAGAAATGAACAAGCTCCGGGCCTCACTAGGGTTGAAACCGCTGAAGTAG |
| Protein: MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGTYGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTGTVADVYQYLEPLYNDYRKLRHKLSDGQFALTHVDEFIDELLTKDYSCDTALPRIQKRWVLEASGTLEPRRSALEDDFEEEEEDKEEQPMEIDQPNGHEKDNHRGRSPARDRDRDRDRDRDRDRDRDRKHERHHRDRDHDRDRDYDRDYGRGRDRDRDRDRERDRNRDRDRDRHRLRDDDYSRDRDRDRERDGRERERRDRDRGRHRSRSRSRDRRDRDREDGEYRRRRDRGSVSPRGRGEDGATREEPKRKKEKKEKKGEPNAPDPNDPEIIEMNKLRASLGLKPLK |